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Open-Source — ultimaker (Ultimaker) / debian-backup — Project

A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.

Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

r-bioc-biobase 2.42.0-1

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One-liner (summary)

base functions for Bioconductor

Description

Biobase is part of the Bioconductor project, and is used by many other packages. Biobase contains standardized data structures to represent genomic data, and functions that are needed by many other packages or which replace R functions.

Bioconductor is a project to develop innovative software tools for use in computational biology. It is based on the R language. You should already be quite familiar with R before using Bioconductor. Bioconductor packages provide flexible interactive tools for carrying out a number of different computational tasks.

License

Unknown

Size

2.1 MB

Downloads

Status	Completed
Checksum (MD5)	faf3af8c0545b5c85ba9959891648aa4
Checksum (SHA-1)	07703e4ab723d7ce1348f46f0551ad488741ce71
Checksum (SHA-256)	6de44207c58a105788dee1db98c9683b278ff5d93e606baba9bd2681ca6f5a6b
Checksum (SHA-512)	71d21f24cbe3665f56458caf2f4f328b88120123578883c004817c53ef581421ac…
GPG Signature	Download
GPG Fingerprint	c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution	debian/buster - Debian - 10 (Buster)
Storage Region	Dublin, Ireland
Type	Binary (contains binaries and binary artifacts)
Uploaded At	11 months, 3 weeks ago
Uploaded By
Slug Id	r-bioc-biobase_2420-1_arm64deb-isdl
Unique Id	1oT8CLxnybFt
Version (Raw)	2.42.0-1
Version (Parsed)	Major: 2 Minor: 42 Patch: 0 Pre (Str): (empty) Pre (Num Array): 1 Type: SemVer (Strict)
	extended metadata
Homepage	https://bioconductor.org/packages/Biobase/
Installed Size	2.9 MB
Maintainer	Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Priority	optional
Section	gnu-r

Dependencies

Checksum (md5)

e546083aed9b61dfe3c90a4877471ef4

Depends	libc6	>=2.17
Depends	r-api-3.5
Depends	r-base-core	>=3.5.1-1
Depends	r-bioc-biocgenerics	>=0.27.1
Recommends	r-cran-runit

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<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/r-bioc-biobase/2.42.0-1/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/r-bioc-biobase/2.42.0-1/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true" alt="This version of 'r-bioc-biobase' @ Cloudsmith" /></a>

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<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/r-bioc-biobase/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/r-bioc-biobase/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true" alt="Latest version of 'r-bioc-biobase' @ Cloudsmith" /></a>

rendered as:

These instructions assume you have setup the repository first (or read it).

To install/use r-bioc-biobase @ version 2.42.0-1 ...

To install packages, you can quickly setup the repository automatically (recommended):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update

sudo apt-get install r-bioc-biobase=2.42.0-1

Warning: Note that this package is for Debian 10 (Buster) / arm64 and may only work for that configuration.

Still stuck? Need help? Don't panic. Just contact us for help (even if you're not a customer).

Previous Version: 2.42.0-1

Next Version: 2.42.0-1

r-bioc-biobase 2.42.0-1	debian/buster deb armhf main latest 2.1 MB — 11 months, 2 weeks ago	1
r-bioc-biobase 2.42.0-1	debian/buster deb arm64 main latest 2.1 MB — 11 months, 3 weeks ago	4
r-bioc-biobase 2.42.0-1	debian/buster deb armhf main latest 2.1 MB — 11 months, 2 weeks ago	1

r-bioc-biobase 2.42.0-1

One-liner (summary)

Description

License

Size

Downloads

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This package has 161 files/directories.

r-bioc-biobase

r-bioc-biobase

r-bioc-biobase

Dependencies

Checksum (md5)