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 Open-Source ultimaker ultimaker (Ultimaker) / debian-backup Project
A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.
Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

Debian logo python3-biopython  1.73+dfsg-1

One-liner (summary)

Python library for bioinformatics (implemented in Python 3)

Description

The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.

It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.

This package is targeting Python version 3.

License

Unknown

Size

1.2 MB

Downloads

6

Status  Completed
Checksum (MD5) fa8a577834691761dcbaa120f0c262ba
Checksum (SHA-1) 12fa931b93b25a63d7bbf6a2864880a3287e72b7
Checksum (SHA-256) c3fb74fe37758b4fabb076620595f7ce51a0e9161fb06c0a67d33ba5ff7ade92
Checksum (SHA-512) 0a5a053db71f5f7ba160a885cf9082430d7ea6ecb25c2ddc91301f22d32036f98b…
GPG Signature
GPG Fingerprint c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution debian/buster - Debian - 10 (Buster)
Storage Region  Dublin, Ireland
Type  Binary (contains binaries and binary artifacts)
Uploaded At 1 year ago
Uploaded By alex-borro
Slug Id python3-biopython_173dfsg-1_arm64deb-pwhz
Unique Id ehrZDNQaBfuQ
Version (Raw) 1.73+dfsg-1
Version (Parsed)
  • Major: 1
  • Minor: 73
  • Type: SemVer (Compat)
  • Metadata: dfsg-1
  extended metadata
Homepage http://biopython.org
Installed Size 8.7 MB
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Priority optional
Section python
Source python-biopython
pkg python3-biopython_1.73+dfsg-1_a… 6
1.2 MB
md5 sha1 sha256 sha512
Package Contents (python3-biopython_1.73+dfsg-1_arm64.deb)
Loading...

This package has 667 files/directories.

Dependencies

34

Checksum (md5)

9ced0e5e68f116f85a63ea8efa3eefd4

Depends
libc6 >=2.17
Depends
python3 <<3.8
Depends
python3 >=3.7~
Depends
python3-numpy >=1:1.16.0~rc1
Depends
python3-numpy-abi9
Depends
python3-reportlab
Depends
python3:any
Recommends
ncbi-blast+
Recommends
python-biopython-doc =1.73+dfsg-1
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These instructions assume you have setup the repository first (or read it).

To install/use python3-biopython @ version 1.73+dfsg-1 ...

To install packages, you can quickly setup the repository automatically (recommended):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update
sudo apt-get install python3-biopython=1.73+dfsg-1
Warning: Note that this package is for Debian 10 (Buster) / arm64 and may only work for that configuration.
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