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 Open-Source ultimaker ultimaker (Ultimaker) / debian-backup Project
A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.
Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

Debian logo python-bumps-doc  0.7.11-2

One-liner (summary)

data fitting and Bayesian uncertainty modeling for inverse problems (docs)

Description

Bumps is a set of routines for curve fitting and uncertainty analysis from a Bayesian perspective. In addition to traditional optimizers which search for the best minimum they can find in the search space, bumps provides uncertainty analysis which explores all viable minima and finds confidence intervals on the parameters based on uncertainty in the measured values. Bumps has been used for systems of up to 100 parameters with tight constraints on the parameters. Full uncertainty analysis requires hundreds of thousands of function evaluations, which is only feasible for cheap functions, systems with many processors, or lots of patience.

Bumps includes several traditional local optimizers such as Nelder-Mead simplex, BFGS and differential evolution. Bumps uncertainty analysis uses Markov chain Monte Carlo to explore the parameter space. Although it was created for curve fitting problems, Bumps can explore any probability density function, such as those defined by PyMC. In particular, the bumps uncertainty analysis works well with correlated parameters.

Bumps can be used as a library within your own applications, or as a framework for fitting, complete with a graphical user interface to manage your models.

This is the common documentation package.

License

Unknown

Size

2.3 MB

Downloads

4

Status  Completed
Checksum (MD5) 5f3b874f4b2585068d54aa1f09a73243
Checksum (SHA-1) f7bc1d62cdde10d07a9eddded5aee6e189bace42
Checksum (SHA-256) 86cf7101a62d29be82922df6596c000263d24c87bb1d3544a63857843e92ef9c
Checksum (SHA-512) 36c025cb86a05ccd1d31b026e85a12fcb4534901c7117c51a83c31bc52caaa8454…
GPG Signature
GPG Fingerprint c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution debian/buster - Debian - 10 (Buster)
Storage Region  Dublin, Ireland
Type  Binary (contains binaries and binary artifacts)
Uploaded At 1 year ago
Uploaded By alex-borro
Slug Id python-bumps-doc_0711-2_alldeb-k4sa
Unique Id gezjZZcHst20
Version (Raw) 0.7.11-2
Version (Parsed)
  • Major: 0
  • Minor: 7
  • Patch: 11
  • Pre (Str): (empty)
  • Pre (Num Array): 2
  • Type: SemVer (Strict)
  extended metadata
Homepage https://github.com/bumps/bumps
Installed Size 8.3 MB
Maintainer Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Priority optional
Section doc
Source python-bumps
pkg python-bumps-doc_0.7.11-2_all.d… 4
2.3 MB
md5 sha1 sha256 sha512
Package Contents (python-bumps-doc_0.7.11-2_all.deb)
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This package has 356 files/directories.

Dependencies

3

Checksum (md5)

4bfd3e9ca288f630c023863b88e8bcf8

Depends
libjs-jquery
Depends
libjs-mathjax
Depends
libjs-sphinxdoc >=1.0

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curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update
sudo apt-get install python-bumps-doc=0.7.11-2
Warning: Note that this package is for Debian 10 (Buster) / all and may only work for that configuration.
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