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 Open-Source ultimaker ultimaker (Ultimaker) / debian-backup Project
A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.
Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

Debian logo pyscanfcs  0.3.2+ds-2

One-liner (summary)

scientific tool for perpendicular line scanning FCS

Description

When a membrane is scanned perpendicularly to its surface, the fluorescence signal originating from the membrane itself must be separated from the signal of the surrounding medium for an FCS analysis. PyScanFCS interactively extracts the fluctuating fluorescence signal from such measurements and applies a multiple-tau algorithm. The obtained correlation curves can be evaluated using PyCorrFit.

Package provides the Python module pyscanfcs and its graphical user interface. The graphical user interface is written in wxPython.

License

Unknown

Size

491.4 KB

Downloads

4

Status  Completed
Checksum (MD5) cfca93f7aeb4b853a71e4c0a28fd5f92
Checksum (SHA-1) 67b86de12eb75fd72f658ed013d5d6081eae2da8
Checksum (SHA-256) e173ee91ab29bfc9bd55a1e6b004545e37edaf93e51eb8de520a08fbd95f18ae
Checksum (SHA-512) 2d0df3ac4627eddca66003a295f8af8748bf043d94b3bd4f1b5495e1062df7ca92…
GPG Signature
GPG Fingerprint c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution debian/buster - Debian - 10 (Buster)
Storage Region  Dublin, Ireland
Type  Binary (contains binaries and binary artifacts)
Uploaded At 11 months ago
Uploaded By alex-borro
Slug Id pyscanfcs_032ds-2_arm64deb-32q5
Unique Id 5C4wmUSsWLZM
Version (Raw) 0.3.2+ds-2
Version (Parsed)
  • Major: 0
  • Minor: 3
  • Patch: 2
  • Type: SemVer (Strict)
  • Metadata: ds-2
  extended metadata
Homepage https://fcs-analysis.github.io/PyScanFCS/
Installed Size 718.0 KB
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Priority optional
Section python
pkg pyscanfcs_0.3.2+ds-2_arm64.deb 4
491.4 KB
md5 sha1 sha256 sha512
Package Contents (pyscanfcs_0.3.2+ds-2_arm64.deb)
Loading...

This package has 61 files/directories.

Dependencies

11

Checksum (md5)

062ed7e180cca4741563cfb60dbc5b2e

Depends
libc6 >=2.17
Depends
python3 <<3.8
Depends
python3 >=3.7~
Depends
python3-astropy
Depends
python3-matplotlib
Depends
python3-multipletau
Depends
python3-numpy
Depends
python3-scipy
Depends
python3-skimage
Depends
python3-wxgtk4.0
Depends
python3:any

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|This version of 'pyscanfcs' @ Cloudsmith|
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image::https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/pyscanfcs/0.3.2+ds-2/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true[link="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/pyscanfcs/0.3.2+ds-2/a=arm64;xc=main;d=debian%252Fbuster;t=binary/",title="This version of 'pyscanfcs' @ Cloudsmith"]
<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/pyscanfcs/0.3.2+ds-2/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/pyscanfcs/0.3.2+ds-2/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true" alt="This version of 'pyscanfcs' @ Cloudsmith" /></a>

rendered as: This version of 'pyscanfcs' @ Cloudsmith

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|Latest version of 'pyscanfcs' @ Cloudsmith|
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   :target: https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/pyscanfcs/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/
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<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/pyscanfcs/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/pyscanfcs/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true" alt="Latest version of 'pyscanfcs' @ Cloudsmith" /></a>

rendered as: Latest version of 'pyscanfcs' @ Cloudsmith

These instructions assume you have setup the repository first (or read it).

To install/use pyscanfcs @ version 0.3.2+ds-2 ...

To install packages, you can quickly setup the repository automatically (recommended):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update
sudo apt-get install pyscanfcs=0.3.2+ds-2
Warning: Note that this package is for Debian 10 (Buster) / arm64 and may only work for that configuration.
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