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Open-Source — ultimaker (Ultimaker) / debian-backup — Project

A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.

Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

openslide-tools 3.4.1+dfsg-4

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One-liner (summary)

Manipulation and conversion tools for OpenSlide

Description

OpenSlide is a C library that provides a simple interface to read whole-slide images also known as virtual slides.

Whole-slide images, also known as virtual slides, are large, high resolution images used in digital pathology. Reading these images using standard image tools or libraries is a challenge because these tools are typically designed for images that can comfortably be uncompressed into RAM or a swap file. Whole-slide images routinely exceed RAM sizes, often occupying tens of gigabytes when uncompressed. Additionally, whole-slide images are typically multi-resolution, and only a small amount of image data might be needed at a particular resolution.

This library currently supports: - Aperio (.svs, .tif) - Hamamatsu (.vms, .vmu, .ndpi) - Leica (.scn) - MIRAX (.mrxs) - Sakura (.svslide) - Trestle (.tif) - Generic tiled TIFF (.tif)

This package contains command line tools for file manipulation.

License

Unknown

Size

17.5 KB

Downloads

Status	Completed
Checksum (MD5)	b5d99915426bbfdcbf19986b8d18f213
Checksum (SHA-1)	9cad76dc716e96ba334fc42b0c0c901768edfab3
Checksum (SHA-256)	97216d7452e024ff26dd4d1739d21ec162fafb236bd2c1d6e61ddab67dfe0659
Checksum (SHA-512)	9fa097dea6e2d3fe3deb4a7767f276145f3b05885b800414df56e0fac69a1c5555…
GPG Signature	Download
GPG Fingerprint	c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution	debian/buster - Debian - 10 (Buster)
Storage Region	Dublin, Ireland
Type	Binary (contains binaries and binary artifacts)
Uploaded At	8 months, 2 weeks ago
Uploaded By
Slug Id	openslide-tools_341dfsg-4_arm64deb-sll8
Unique Id	1mBweMemz2X5
Version (Raw)	3.4.1+dfsg-4
Version (Parsed)	Major: 3 Minor: 4 Patch: 1 Type: SemVer (Strict) Metadata: dfsg-4
	extended metadata
Homepage	http://openslide.org
Installed Size	60.0 KB
Maintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Priority	optional
Section	graphics
Source	openslide

Dependencies

Checksum (md5)

f7a5ea602b826d12db42657219065518

Depends	libc6	>=2.17
Depends	libglib2.0-0	>=2.16.0
Depends	libjpeg62-turbo	>=1.3.1
Depends	libopenslide0
Depends	libpng16-16	>=1.6.2-1
Depends	zlib1g	>=1:1.1.4
Suggests	libtiff-tools

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[![This version of 'openslide-tools' @ Cloudsmith](https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true)](https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/)

|This version of 'openslide-tools' @ Cloudsmith|
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image::https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true[link="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/",title="This version of 'openslide-tools' @ Cloudsmith"]

<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/3.4.1+dfsg-4/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true" alt="This version of 'openslide-tools' @ Cloudsmith" /></a>

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[![Latest version of 'openslide-tools' @ Cloudsmith](https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true)](https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/)

|Latest version of 'openslide-tools' @ Cloudsmith|
.. |Latest version of 'openslide-tools' @ Cloudsmith| image:: https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true
   :target: https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/

image::https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true[link="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/",title="Latest version of 'openslide-tools' @ Cloudsmith"]

<a href="https://cloudsmith.io/~ultimaker/repos/debian-backup/packages/detail/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/"><img src="https://api.cloudsmith.com/v1/badges/version/ultimaker/debian-backup/deb/openslide-tools/latest/a=arm64;xc=main;d=debian%252Fbuster;t=binary/?render=true&show_latest=true" alt="Latest version of 'openslide-tools' @ Cloudsmith" /></a>

rendered as:

These instructions assume you have setup the repository first (or read it).

To install/use openslide-tools @ version 3.4.1+dfsg-4 ...

To install packages, you can quickly setup the repository automatically (recommended):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update

sudo apt-get install openslide-tools=3.4.1+dfsg-4

Warning: Note that this package is for Debian 10 (Buster) / arm64 and may only work for that configuration.

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