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Open-Source — ultimaker (Ultimaker) / debian-backup — Project

A certifiably-awesome open-source package repository curated by Ultimaker, hosted by Cloudsmith.

Note: Packages in this repository are licensed as GNU General Public License v3.0 or later (dependencies may be licensed differently).

libmstoolkit-tools 82-6

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One-liner (summary)

libraries for manipulating mass spectrometry data - tools

Description

The MSToolkit is a light-weight C++ library for reading, writing, and manipulating mass spectrometry data. The MSToolkit is easily linked to virtually any C++ algorithm for simple, fast file reading and analysis.

Supported File Formats: ----------------------- - read-only mzML including internal compression (zlib and numpress) and external compression (.mzML.gz) read-only; - read-only mzXML including internal compression (zlib) and external compression (.mzXML.gz) - read/write mgf, ms1, ms2, bms1, bms2, cms1, cms2

Simple Interface: ------------------ - Open any file format from a single function call; - Store any spectrum in a simple, comprehensive data structure; - Sequential or random-access file reading.

This package ships a MS/MS spectrum loader tool.

License

Unknown

Size

11.1 KB

Downloads

Status	Completed
Checksum (MD5)	4c1d24cfa621b6756c9779df2999ebb5
Checksum (SHA-1)	045ceed19b460fa631c2ad4a91c4e3e237932998
Checksum (SHA-256)	8be56607f1b68a90ef49d5942ee26ca008774d74010e42c8214f82b176f15226
Checksum (SHA-512)	3cb8d077e88454df0a3417ea4e37065418c7f98b5d9c435cb426685b8252b10406…
GPG Signature	Download
GPG Fingerprint	c0a114330029b468b1146f70c334efcb2c4f9be3
Distribution	debian/buster - Debian - 10 (Buster)
Storage Region	Dublin, Ireland
Type	Binary (contains binaries and binary artifacts)
Uploaded At	10 months, 1 week ago
Uploaded By
Slug Id	libmstoolkit-tools_82-6_arm64deb-b1nc
Unique Id	t6l86JuFiFDf
Version (Raw)	82-6
Version (Parsed)	Type: Unknown
	extended metadata
Homepage	https://github.com/mhoopmann/mstoolkit
Installed Size	42.0 KB
Maintainer	The Debichem Group <debichem-devel@lists.alioth.debian.org>
Priority	optional
Section	science
Source	libmstoolkit

	libmstoolkit-tools 82-6	debian/buster deb arm64 main latest 11.1 KB — 10 months, 1 week ago	2

Dependencies

Checksum (md5)

9797e9fb84875161136d5ca90c304605

Depends	libc6	>=2.17
Depends	libexpat1	>=2.0.1
Depends	libgcc1	>=1:3.0
Depends	libmstoolkit82	=82-6
Depends	libsqlite3-0	>=3.5.9
Depends	libstdc++6	>=4.1.1
Depends	zlib1g	>=1:1.1.4

These instructions assume you have setup the repository first (or read it).

To install/use libmstoolkit-tools @ version 82-6 ...

To install packages, you can quickly setup the repository automatically (recommended):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E bash

If you need to force a specific distribution, release/version, architecture, or component (if supported), you can also do that (e.g. if your system is compatible but not identical):

curl -1sLf \
  'https://dl.cloudsmith.io/public/ultimaker/debian-backup/setup.deb.sh' \
  | sudo -E distro=debian codename=buster arch=ARCH component=COMPONENT bash

or ... you can manually configure it yourself before installing packages:

apt-get install -y debian-keyring  # debian only
apt-get install -y debian-archive-keyring  # debian only
apt-get install -y apt-transport-https
# For Debian Stretch, Ubuntu 16.04 and later
keyring_location=/usr/share/keyrings/ultimaker-debian-backup-archive-keyring.gpg
# For Debian Jessie, Ubuntu 15.10 and earlier
keyring_location=/etc/apt/trusted.gpg.d/ultimaker-debian-backup.gpg
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/gpg.C334EFCB2C4F9BE3.key' |  gpg --dearmor >> ${keyring_location}
curl -1sLf 'https://dl.cloudsmith.io/public/ultimaker/debian-backup/config.deb.txt?distro=debian&codename=buster&component=main' > /etc/apt/sources.list.d/ultimaker-debian-backup.list
sudo chmod 644 ${keyring_location}
sudo chmod 644 /etc/apt/sources.list.d/ultimaker-debian-backup.list
apt-get update

sudo apt-get install libmstoolkit-tools=82-6

Warning: Note that this package is for Debian 10 (Buster) / arm64 and may only work for that configuration.

Still stuck? Need help? Don't panic. Just contact us for help (even if you're not a customer).

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