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Python logo braintools  0.1.4

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One-liner (summary)

Modeling tools for brain simulation.

Description

# Modeling tools for brain simulation

<p align="center">
<img alt="Header image of braintools." src="https://raw.githubusercontent.com/chaobrain/braintools/main/docs/_static/braintools.png" width=50%>

</p>

<p align="center">

<a href="https://pypi.org/project/braintools/"><img alt="Supported Python Version" src="https://img.shields.io/pypi/pyversions/braintools"></a> <a href="https://github.com/chaobrain/braintools/blob/main/LICENSE"><img alt="LICENSE" src="https://img.shields.io/badge/License-Apache%202.0-blue.svg"></a> <a href='https://braintools.readthedocs.io/?badge=latest'>

<img src='https://readthedocs.org/projects/braintools/badge/?version=latest' alt='Documentation Status' />

</a> <a href="https://badge.fury.io/py/braintools"><img alt="PyPI version" src="https://badge.fury.io/py/braintools.svg"></a> <a href="https://github.com/chaobrain/braintools/actions/workflows/CI.yml"><img alt="Continuous Integration" src="https://github.com/chaobrain/braintools/actions/workflows/CI.yml/badge.svg"></a> <a href="https://doi.org/10.5281/zenodo.17110064"><img src="https://zenodo.org/badge/776629792.svg" alt="DOI"></a>

</p>

braintools is a lightweight, JAX-friendly toolbox with practical utilities for brain modeling.

## Highlights

  • Composable connectivity: declarative builders for point, multi-compartment, and population networks with spatial kernels, degree constraints, and unit-aware metadata
  • Visualization suite: publication plots, interactive dashboards, 3D viewers, and animation helpers in braintools.visualize
  • Metrics and solvers: losses, evaluation metrics, and PyTree-aware ODE/SDE/DDE integrators ready for jit/vmap
  • Signal and optimization helpers: reusable generators and lightweight optimizers to prototype models quickly

braintools integrates smoothly with the broader ecosystem (e.g., brainstate, brainunit) while keeping a simple, functional style.

## Installation

`bash pip install -U braintools `

Optional extras are published for hardware-specific builds:

`bash pip install -U braintools[cpu] # CUDA 12.x wheels pip install -U braintools[cuda12] # TPU runtime pip install -U braintools[tpu] `

Alternatively, install the curated BrainX bundle that ships with braintools and related projects:

`bash pip install -U BrainX `

## Documentation

The full documentation is available at https://braintools.readthedocs.io

## Ecosystem

braintools is one part of our brain simulation ecosystem: https://brainmodeling.readthedocs.io/

## Contributing

Contributions and issue reports are welcome! See CONTRIBUTING.md for guidelines.

## License

Apache 2.0. See LICENSE for details.

## Citation

If you use braintools in your work, please cite the Zenodo DOI: [10.5281/zenodo.17110064](https://doi.org/10.5281/zenodo.17110064)

License

Apache License 2.0

Size

540.9 KB

Downloads

6

Tags

bdist/wheel whl noarch py3 upstream python-upstream-pro… latest

Status  Completed
Checksum (MD5) 65ec42e3dfa47c69e05162e66968e623
Checksum (SHA-1) 7414f7305ca6cbef770d4fff54b6ae1362d95a38
Checksum (SHA-256) c7b62cb4446eec28585d9463a08fa496f4213399d26b2a79db3e14d57cf48b9d
Checksum (SHA-512) af7da2adc3c2b8e26577e295f41c237a33c8ff1981d66eb2d8d9506f4e99cb490e…
GPG Signature
Download
GPG Fingerprint 6811684bac0b8895434e97bdd4391b8fb999e537
Storage Region  Dublin, Ireland
Type  Binary (contains binaries and binary artifacts)
Uploaded At 4 months, 3 weeks ago
Uploaded By Fetched by Cloudsmith
Slug Id braintools-014-py3-none-anywhl-zmsy
Unique Id okL4szd40XTjMNRY
Version (Raw) 0.1.4
Version (Parsed)
  • Major: 0
  • Minor: 1
  • Patch: 4
  • Type: SemVer (Compat)
  extended metadata
Author BrainTools Developers <chao.brain@qq.com>
Classifiers Development Status :: 4 - Beta | Intended Audience :: Developers | Intended Audience :: Science/Research | Natural Language :: English | Operating System :: OS Independent | Programming Language :: Python | Programming Language :: Python :: 3 | Programming Language :: Python :: 3.10 | Programming Language :: Python :: 3.11 | Programming Language :: Python :: 3.12 | Programming Language :: Python :: 3.13 | Topic :: Scientific/Engineering :: Artificial Intelligence | Topic :: Scientific/Engineering :: Bio-Informatics | Topic :: Scientific/Engineering :: Mathematics | Topic :: Software Development :: Libraries
Keywords brain dynamics programming,brain simulation,brain-inspired computing
Metadata Version 2.4
Project Urls Bug Tracker, https://github.com/chaobrain/braintools/issues | Documentation, https://braintools.readthedocs.io/ | homepage, https://github.com/chaobrain/braintools | repository, https://github.com/chaobrain/braintools
Py Filetype bdist_wheel
Py Version py3
Requires Dist absl-py; extra == "testing" | brainstate; extra == "cpu" | brainstate; extra == "cuda12" | brainstate; extra == "cuda13" | brainstate; extra == "testing" | brainstate; extra == "tpu" | brainstate>=0.1.0 | brainunit; extra == "cpu" | brainunit; extra == "cuda12" | brainunit; extra == "cuda13" | brainunit; extra == "testing" | brainunit; extra == "tpu" | brainunit>=0.0.8 | jax | jax; extra == "testing" | jax[cpu]; extra == "cpu" | jax[cuda12]; extra == "cuda12" | jax[cuda13]; extra == "cuda13" | jax[tpu]; extra == "tpu" | matplotlib | matplotlib; extra == "cpu" | matplotlib; extra == "cuda12" | matplotlib; extra == "cuda13" | matplotlib; extra == "testing" | matplotlib; extra == "tpu" | msgpack | msgpack; extra == "cpu" | msgpack; extra == "cuda12" | msgpack; extra == "cuda13" | msgpack; extra == "testing" | msgpack; extra == "tpu" | nevergrad; extra == "testing" | numpy>=1.15 | optax | optax; extra == "cpu" | optax; extra == "cuda12" | optax; extra == "cuda13" | optax; extra == "testing" | optax; extra == "tpu" | pytest; extra == "testing" | scipy | scipy; extra == "cpu" | scipy; extra == "cuda12" | scipy; extra == "cuda13" | scipy; extra == "testing" | scipy; extra == "tpu" | typing_extensions | typing_extensions; extra == "cpu" | typing_extensions; extra == "cuda12" | typing_extensions; extra == "cuda13" | typing_extensions; extra == "testing" | typing_extensions; extra == "tpu"
Requires Python >=3.10
pkg braintools-0.1.4-py3-none-any.w… 6
540.9 KB 		md5 sha1 sha256 sha512
Package Contents (braintools-0.1.4-py3-none-any.whl)
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This package has 145 files/directories.

Last scanned

4 months, 3 weeks ago

Scan result

Clean

Vulnerability count

0

Max. severity

Unknown

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