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Public — demo-docs / awesome-repo

A certifiably-awesome public package repository curated by demo-docs, hosted by Cloudsmith.

brainplotlib 0.3.0

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One-liner (summary)

A lightweight package to plot brain surfaces with Python.

Description

This is a Python package that plots data on cortical surface.

![brain image](https://github.com/feilong/brainplotlib/raw/main/images/random_data_with_colorbar.png)

## Installation The package can be installed with pip: `bash pip install brainplotlib `

## Example usage

```Python import numpy as np from brainplotlib import brain_plot

## Generate some random data # In this case it's icoorder3 resolution (642 vertices per hemisphere), and # the non-cortical vertices have been masked out (588 and 587 remaining # vertices for the left and right hemisphere, respectively). rng = np.random.default_rng(0) v = rng.random((1175, ))

img, scale = brain_plot(v, vmax=1, vmin=0, cmap='viridis', return_scale=True) ```

The rendered image is a NumPy array. It can be rendered using matplotlib: `Python import matplotlib.pyplot as plt fig = plt.figure(figsize=(img.shape[1] / 200, img.shape[0] / 200), dpi=200) plt.imshow(img) plt.axis('off') cbar = plt.colorbar(scale, shrink=0.8, aspect=30) plt.savefig('random_data_with_colorbar.png', bbox_inches='tight') plt.show() `

Alternatively, the high-resolution image can be saved directly using cv2. ```Python import cv2 cv2.imwrite(

'random_data.png', np.round(img[:, :, [2, 1, 0]] * 255).astype(np.uint8))

```

License

Unknown

Size

3.3 MB

Downloads

Status	Completed
Checksum (MD5)	40208cfc2ba08eb8c5889a8d80fd70de
Checksum (SHA-1)	3783e090ae1db63b9fbc8c83ca190b8936673f02
Checksum (SHA-256)	80a5302c9a8a8e14848edd452d265a4d5cd5b6e640c5d4674b464f03352fb5bb
Checksum (SHA-512)	93224eabf77337187388689c6c7c69eda303f553f00eb29cbbc8af799e469c9d1a…
GPG Signature	Download
GPG Fingerprint	6811684bac0b8895434e97bdd4391b8fb999e537
Storage Region	Dublin, Ireland
Type	Binary (contains binaries and binary artifacts)
Uploaded At	4 months, 3 weeks ago
Uploaded By
Slug Id	brainplotlib-030-py3-none-anywhl-f4j2
Unique Id	SPkNZjGSX5C1bKPu
Version (Raw)	0.3.0
Version (Parsed)	Major: 0 Minor: 3 Patch: 0 Type: SemVer (Compat)
	extended metadata
Author	Ma Feilong <mafeilong@gmail.com>
Classifiers	Programming Language :: Python :: 3
Homepage URL	https://github.com/feilong/brainplotlib
Keywords	brain,surface,fmri,plotting,visualization
Metadata Version	2.1
Project Urls	Bug Tracker, https://github.com/feilong/brainplotlib/issues
Py Filetype	bdist_wheel
Py Version	py3
Requires Dist	matplotlib \| numpy \| pytest ; extra == 'tests'
Requires Python	>=3.6

Newer	brainplotlib 1.0.0	bdist/wheel whl noarch py3 upstream python-upstream-pro… latest 8.0 MB — 4 months, 3 weeks ago	7
Newer	brainplotlib 0.5.0	bdist/wheel whl noarch py3 upstream python-upstream-pro… 7.8 MB — 4 months, 3 weeks ago	8
Newer	brainplotlib 0.4.1	bdist/wheel whl noarch py3 python-upstream-pro… upstream 7.8 MB — 4 months, 3 weeks ago	12
Newer	brainplotlib 0.4.0	bdist/wheel whl noarch py3 upstream python-upstream-pro… 7.8 MB — 4 months, 3 weeks ago	10
	brainplotlib 0.3.0	bdist/wheel whl noarch py3 python-upstream-pro… upstream 3.3 MB — 4 months, 3 weeks ago	12
Older	brainplotlib 0.2.0	bdist/wheel whl noarch py3 python-upstream-pro… upstream 3.3 MB — 4 months, 3 weeks ago	9
Older	brainplotlib 0.1.1	bdist/wheel whl noarch py3 upstream python-upstream-pro… 117.6 KB — 4 months, 3 weeks ago	5

Last scanned

4 months, 3 weeks ago

Scan result

Clean

Vulnerability count

Max. severity

Unknown

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To install/use brainplotlib @ version 0.3.0 ...

pip install 'brainplotlib==0.3.0'

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pip install --upgrade 'brainplotlib'

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  --index-url=https://dl.cloudsmith.io/public/demo-docs/awesome-repo/python/simple/ \
  brainplotlib==0.3.0

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brainplotlib==0.3.0

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Previous Version: 0.2.0

Next Version: 0.4.0

brainplotlib 0.3.0

One-liner (summary)

Description

License

Size

Downloads

Tags

This package has 24 files/directories.

brainplotlib

brainplotlib

brainplotlib

brainplotlib

brainplotlib

brainplotlib

brainplotlib

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